Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Prom1O54990 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Prom1O54990 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Prom1O54990 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Prom1O54990 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.57■□□□□ 0.24
Prom1O54990 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Prom1O54990 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Prom1O54990 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Prom1O54990 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.57■□□□□ 0.24
Prom1O54990 Gm18737-201ENSMUST00000173594 937 ntBASIC16.57■□□□□ 0.24
Prom1O54990 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.57■□□□□ 0.24
Prom1O54990 Gm18049-201ENSMUST00000208909 581 ntBASIC16.57■□□□□ 0.24
Prom1O54990 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.57■□□□□ 0.24
Prom1O54990 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Prom1O54990 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.57■□□□□ 0.24
Prom1O54990 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.57■□□□□ 0.24
Prom1O54990 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prom1O54990 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.56■□□□□ 0.24
Prom1O54990 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Prom1O54990 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.56■□□□□ 0.24
Prom1O54990 Gm15487-201ENSMUST00000122373 465 ntBASIC16.56■□□□□ 0.24
Prom1O54990 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.56■□□□□ 0.24
Prom1O54990 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Prom1O54990 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Prom1O54990 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.56■□□□□ 0.24
Prom1O54990 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Prom1O54990 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Celf4-206ENSMUST00000224553 1729 ntBASIC16.56■□□□□ 0.24
Prom1O54990 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Prom1O54990 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Prom1O54990 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.55■□□□□ 0.24
Prom1O54990 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Prom1O54990 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Prom1O54990 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.55■□□□□ 0.24
Prom1O54990 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Prom1O54990 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.55■□□□□ 0.24
Prom1O54990 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Prom1O54990 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.54■□□□□ 0.24
Prom1O54990 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Prom1O54990 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.54■□□□□ 0.24
Prom1O54990 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Prom1O54990 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms