Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.09□□□□□ -0.15
FxnO35943 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FxnO35943 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
FxnO35943 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
FxnO35943 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
FxnO35943 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.08□□□□□ -0.16
FxnO35943 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.08□□□□□ -0.16
FxnO35943 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.08□□□□□ -0.16
FxnO35943 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.08□□□□□ -0.16
FxnO35943 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.08□□□□□ -0.16
FxnO35943 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.08□□□□□ -0.16
FxnO35943 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.08□□□□□ -0.16
FxnO35943 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.08□□□□□ -0.16
FxnO35943 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.08□□□□□ -0.16
FxnO35943 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.08□□□□□ -0.16
FxnO35943 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FxnO35943 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FxnO35943 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.07□□□□□ -0.16
FxnO35943 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FxnO35943 Gm8318-201ENSMUST00000182954 872 ntBASIC14.07□□□□□ -0.16
FxnO35943 Gm28033-201ENSMUST00000184224 96 ntBASIC14.07□□□□□ -0.16
FxnO35943 Gm37444-201ENSMUST00000193605 439 ntBASIC14.07□□□□□ -0.16
FxnO35943 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.07□□□□□ -0.16
FxnO35943 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FxnO35943 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.07□□□□□ -0.16
FxnO35943 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.07□□□□□ -0.16
FxnO35943 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FxnO35943 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.06□□□□□ -0.16
FxnO35943 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
FxnO35943 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
FxnO35943 Gm11780-201ENSMUST00000136880 516 ntBASIC14.06□□□□□ -0.16
FxnO35943 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.06□□□□□ -0.16
FxnO35943 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.06□□□□□ -0.16
FxnO35943 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Birc2-201ENSMUST00000054878 378 ntBASIC14.06□□□□□ -0.16
FxnO35943 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.06□□□□□ -0.16
FxnO35943 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
FxnO35943 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FxnO35943 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FxnO35943 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms