Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.79□□□□□ -0.52
Tnfsf11O35235 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.78□□□□□ -0.52
Tnfsf11O35235 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Gm23547-201ENSMUST00000158210 271 ntBASIC11.78□□□□□ -0.52
Tnfsf11O35235 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.78□□□□□ -0.52
Tnfsf11O35235 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Gm18959-201ENSMUST00000208954 655 ntBASIC11.78□□□□□ -0.52
Tnfsf11O35235 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tnfsf11O35235 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.77□□□□□ -0.52
Tnfsf11O35235 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfsf11O35235 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.77□□□□□ -0.52
Tnfsf11O35235 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tnfsf11O35235 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Tnfsf11O35235 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfsf11O35235 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Tnfsf11O35235 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms