Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AlyrefO08583 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
AlyrefO08583 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AlyrefO08583 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AlyrefO08583 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
AlyrefO08583 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AlyrefO08583 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AlyrefO08583 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AlyrefO08583 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.25■□□□□ 0.03
AlyrefO08583 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Gm25144-201ENSMUST00000179561 110 ntBASIC15.25■□□□□ 0.03
AlyrefO08583 Gm25352-201ENSMUST00000179815 110 ntBASIC15.25■□□□□ 0.03
AlyrefO08583 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.25■□□□□ 0.03
AlyrefO08583 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
AlyrefO08583 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
AlyrefO08583 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AlyrefO08583 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AlyrefO08583 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.24■□□□□ 0.03
AlyrefO08583 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.24■□□□□ 0.03
AlyrefO08583 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.24■□□□□ 0.03
AlyrefO08583 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.24■□□□□ 0.03
AlyrefO08583 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.24■□□□□ 0.03
AlyrefO08583 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.24■□□□□ 0.03
AlyrefO08583 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
AlyrefO08583 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AlyrefO08583 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AlyrefO08583 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.24■□□□□ 0.03
AlyrefO08583 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AlyrefO08583 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AlyrefO08583 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AlyrefO08583 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
AlyrefO08583 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Gm15358-201ENSMUST00000119249 520 ntBASIC15.23■□□□□ 0.03
AlyrefO08583 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.23■□□□□ 0.03
AlyrefO08583 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Gm9824-201ENSMUST00000178707 561 ntBASIC15.23■□□□□ 0.03
AlyrefO08583 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.23■□□□□ 0.03
AlyrefO08583 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.23■□□□□ 0.03
AlyrefO08583 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AlyrefO08583 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AlyrefO08583 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.22■□□□□ 0.03
AlyrefO08583 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AlyrefO08583 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AlyrefO08583 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
AlyrefO08583 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.22■□□□□ 0.03
AlyrefO08583 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AlyrefO08583 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
AlyrefO08583 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AlyrefO08583 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AlyrefO08583 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
AlyrefO08583 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AlyrefO08583 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AlyrefO08583 Gm4984-201ENSMUST00000115987 360 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms