Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 AW822252-206ENSMUST00000208904 237 ntBASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf4lE9Q2N0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Gm12008-201ENSMUST00000117791 755 ntBASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf4lE9Q2N0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Gm9727-201ENSMUST00000161387 555 ntBASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf4lE9Q2N0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpsf4lE9Q2N0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms