Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Dchs1E9PVD3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Dchs1E9PVD3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dchs1E9PVD3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Dchs1E9PVD3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Dchs1E9PVD3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dchs1E9PVD3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dchs1E9PVD3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Dchs1E9PVD3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Dchs1E9PVD3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dchs1E9PVD3 Gm11543-201ENSMUST00000120758 370 ntBASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.15□□□□□ -0.3
Dchs1E9PVD3 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dchs1E9PVD3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms