Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gm18187-201ENSMUST00000196476 984 ntBASIC13.51□□□□□ -0.25
Shank1D3YZU1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.51□□□□□ -0.25
Shank1D3YZU1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.51□□□□□ -0.25
Shank1D3YZU1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shank1D3YZU1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Gm10499-201ENSMUST00000174094 934 ntBASIC13.49□□□□□ -0.25
Shank1D3YZU1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Gm16215-201ENSMUST00000161990 637 ntBASIC13.49□□□□□ -0.25
Shank1D3YZU1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Gm9824-201ENSMUST00000178707 561 ntBASIC13.49□□□□□ -0.25
Shank1D3YZU1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.49□□□□□ -0.25
Shank1D3YZU1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.49□□□□□ -0.25
Shank1D3YZU1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shank1D3YZU1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shank1D3YZU1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms