Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cfap99A0A140LIX9 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Gm15427-201ENSMUST00000117288 531 ntBASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Gm13616-201ENSMUST00000120600 222 ntBASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cfap99A0A140LIX9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Gm45612-201ENSMUST00000211320 160 ntBASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cfap99A0A140LIX9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cfap99A0A140LIX9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Gm5177-201ENSMUST00000183092 997 ntBASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Gm5312-201ENSMUST00000203728 547 ntBASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Gm45747-201ENSMUST00000212203 999 ntBASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cfap99A0A140LIX9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cfap99A0A140LIX9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms