Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Carlr-201ENSMUST00000181515 2574 ntBASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.46■□□□□ 0.23
Gm5580A0A0N4SVP8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Gm5580A0A0N4SVP8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Gm5580A0A0N4SVP8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Gm5580A0A0N4SVP8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm12895-201ENSMUST00000122214 226 ntBASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm17807-201ENSMUST00000186869 298 ntBASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5580A0A0N4SVP8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5580A0A0N4SVP8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.43■□□□□ 0.22
Gm5580A0A0N4SVP8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5580A0A0N4SVP8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm5580A0A0N4SVP8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms