Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm13312-201ENSMUST00000119631 718 ntBASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm10231-201ENSMUST00000181584 441 ntBASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm29518-201ENSMUST00000190858 372 ntBASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm10175-202ENSMUST00000208752 441 ntBASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav13d-4A0A0G2JFX3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms