Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm5682-201ENSMUST00000173402 505 ntBASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav13n-1A0A0G2JEU8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm9727-201ENSMUST00000161387 555 ntBASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.94□□□□□ -0.66
Trav13n-1A0A0G2JEU8 Gm45167-201ENSMUST00000208007 322 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms