Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.45□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3n-3A0A0G2JEM0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms