Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.5□□□□□ -0.57
Trdv1A0A075B657 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trdv1A0A075B657 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Gm25016-201ENSMUST00000158399 131 ntBASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Mir3081-201ENSMUST00000175305 84 ntBASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Celf4-206ENSMUST00000224553 1729 ntBASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trdv1A0A075B657 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Gm17808-201ENSMUST00000200859 894 ntBASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Gm18622-201ENSMUST00000219361 595 ntBASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trdv1A0A075B657 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms