Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Gm14722-201ENSMUST00000118943 689 ntBASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-4A0A075B652 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav5-4A0A075B652 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav5-4A0A075B652 Rubie-203ENSMUST00000227803 2430 ntBASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Gm7977-201ENSMUST00000193787 748 ntBASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-4A0A075B652 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-4A0A075B652 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms