Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Gm37856-201ENSMUST00000191634 999 ntBASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav8-1A0A075B641 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav8-1A0A075B641 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Gm5643-201ENSMUST00000117081 966 ntBASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Gm13186-201ENSMUST00000118031 316 ntBASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav8-1A0A075B641 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav8-1A0A075B641 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms