Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Gm25406-201ENSMUST00000157599 105 ntBASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Gm22697-201ENSMUST00000175194 63 ntBASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Gm18101-201ENSMUST00000215769 548 ntBASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16nA0A075B634 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16nA0A075B634 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.41□□□□□ -0.58
Trav16nA0A075B634 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Gm29257-201ENSMUST00000186115 639 ntBASIC11.41□□□□□ -0.58
Trav16nA0A075B634 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.41□□□□□ -0.58
Trav16nA0A075B634 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav16nA0A075B634 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms