Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav5-1A0A075B5Z7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm23935-201ENSMUST00000102303 57 ntBASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm24270-201ENSMUST00000102326 57 ntBASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm24245-201ENSMUST00000157318 57 ntBASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm16026-204ENSMUST00000162652 683 ntBASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav5-1A0A075B5Z7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav5-1A0A075B5Z7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm18737-201ENSMUST00000173594 937 ntBASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Chchd1-203ENSMUST00000224633 557 ntBASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav5-1A0A075B5Z7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms