Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hmg20bQ9Z104 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hmg20bQ9Z104 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Efs-202ENSMUST00000227037 2540 ntBASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hmg20bQ9Z104 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Gm27300-201ENSMUST00000184085 97 ntBASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Gm27335-201ENSMUST00000184758 97 ntBASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hmg20bQ9Z104 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Hmg20bQ9Z104 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Mzt1-203ENSMUST00000227948 952 ntBASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hmg20bQ9Z104 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms