Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nr1h3Q9Z0Y9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm9385-201ENSMUST00000117563 472 ntBASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm16198-201ENSMUST00000118766 670 ntBASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm10154-201ENSMUST00000084445 354 ntBASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nr1h3Q9Z0Y9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nr1h3Q9Z0Y9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nr1h3Q9Z0Y9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Gm18057-201ENSMUST00000208220 503 ntBASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nr1h3Q9Z0Y9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nr1h3Q9Z0Y9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms