Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx9Q9WUH2 Celf4-206ENSMUST00000224553 1729 ntBASIC14.35□□□□□ -0.11
Lhx9Q9WUH2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx9Q9WUH2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx9Q9WUH2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Lhx9Q9WUH2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Gm8396-201ENSMUST00000057361 823 ntBASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx9Q9WUH2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx9Q9WUH2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx9Q9WUH2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx9Q9WUH2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Lhx9Q9WUH2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Thap2-203ENSMUST00000218989 527 ntBASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx9Q9WUH2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Gm45612-201ENSMUST00000211320 160 ntBASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lhx9Q9WUH2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms