Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Gm2274-201ENSMUST00000184539 609 ntBASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Gm7370-201ENSMUST00000219471 767 ntBASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pfdn5Q9WU28 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pfdn5Q9WU28 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Gm12134-201ENSMUST00000122109 520 ntBASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Gm7213-201ENSMUST00000215977 950 ntBASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pfdn5Q9WU28 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms