Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn8aQ9WTU3 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Gm15693-201ENSMUST00000120470 637 ntBASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn8aQ9WTU3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Gm38294-201ENSMUST00000192831 381 ntBASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Scn8aQ9WTU3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.1■□□□□ 0.01
Scn8aQ9WTU3 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms