Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.32□□□□□ -0.28
Nubp1Q9R060 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nubp1Q9R060 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Gm13823-201ENSMUST00000119930 345 ntBASIC13.31□□□□□ -0.28
Nubp1Q9R060 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.31□□□□□ -0.28
Nubp1Q9R060 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.31□□□□□ -0.28
Nubp1Q9R060 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Gm18057-201ENSMUST00000208220 503 ntBASIC13.31□□□□□ -0.28
Nubp1Q9R060 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.31□□□□□ -0.28
Nubp1Q9R060 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.31□□□□□ -0.28
Nubp1Q9R060 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nubp1Q9R060 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.3□□□□□ -0.28
Nubp1Q9R060 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.3□□□□□ -0.28
Nubp1Q9R060 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.3□□□□□ -0.28
Nubp1Q9R060 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.3□□□□□ -0.28
Nubp1Q9R060 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.3□□□□□ -0.28
Nubp1Q9R060 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nubp1Q9R060 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nubp1Q9R060 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms