Protein–RNA interactions for Protein: Q9JKB3

Ybx3, Y-box-binding protein 3, mousemouse

Known RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx3Q9JKB3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ybx3Q9JKB3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx3Q9JKB3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ybx3Q9JKB3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx3Q9JKB3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ybx3Q9JKB3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Gm13216-201ENSMUST00000117145 591 ntBASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ybx3Q9JKB3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Gm5940-201ENSMUST00000117582 1068 ntBASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Gm15460-201ENSMUST00000118147 391 ntBASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Gm11814-201ENSMUST00000119515 929 ntBASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Gm27572-201ENSMUST00000183702 255 ntBASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Gm2495-201ENSMUST00000191160 466 ntBASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Gm7399-201ENSMUST00000032395 858 ntBASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ybx3Q9JKB3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Gm13464-201ENSMUST00000119418 935 ntBASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Gm38241-201ENSMUST00000192641 898 ntBASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ybx3Q9JKB3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Gm23931-201ENSMUST00000103842 109 ntBASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Gm29127-201ENSMUST00000188304 517 ntBASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Gm2451-201ENSMUST00000199447 999 ntBASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Gm10290-201ENSMUST00000200451 999 ntBASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Gm8463-201ENSMUST00000208573 613 ntBASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ybx3Q9JKB3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ybx3Q9JKB3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ybx3Q9JKB3 BC001981-202ENSMUST00000191393 1545 ntBASIC19.42■□□□□ 0.7
Ybx3Q9JKB3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ybx3Q9JKB3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ybx3Q9JKB3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms