Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smco4Q9JIS3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Actl10-202ENSMUST00000226583 1501 ntBASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Gm37025-201ENSMUST00000195159 829 ntBASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smco4Q9JIS3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Gm6211-202ENSMUST00000167849 925 ntBASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.15□□□□□ -0.46
Smco4Q9JIS3 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.15□□□□□ -0.47
Smco4Q9JIS3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smco4Q9JIS3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Smco4Q9JIS3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Smco4Q9JIS3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Smco4Q9JIS3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Smco4Q9JIS3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms