Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trim39Q9ESN2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.16□□□□□ -0.14
Trim39Q9ESN2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim39Q9ESN2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Gm25745-201ENSMUST00000174945 133 ntBASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim39Q9ESN2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim39Q9ESN2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gm15372-201ENSMUST00000120729 834 ntBASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gm19891-201ENSMUST00000189771 303 ntBASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Gm9172-201ENSMUST00000212092 954 ntBASIC14.14□□□□□ -0.15
Trim39Q9ESN2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms