Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Gm18115-201ENSMUST00000221209 621 ntBASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ube4bQ9ES00 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Gm13559-201ENSMUST00000120476 863 ntBASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ube4bQ9ES00 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube4bQ9ES00 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube4bQ9ES00 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms