Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a3bpQ9EQG9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a3bpQ9EQG9 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.32■□□□□ 0.36
Col4a3bpQ9EQG9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a3bpQ9EQG9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a3bpQ9EQG9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a3bpQ9EQG9 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Mir5126-201ENSMUST00000175513 77 ntBASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a3bpQ9EQG9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3bpQ9EQG9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Gm6550-201ENSMUST00000187574 993 ntBASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Col4a3bpQ9EQG9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3bpQ9EQG9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms