Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Gm9726-201ENSMUST00000180321 678 ntBASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Gm27306-201ENSMUST00000183970 107 ntBASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Gm28630-201ENSMUST00000187806 498 ntBASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Gm18049-201ENSMUST00000208909 581 ntBASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cpsf1Q9EPU4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Gm6539-201ENSMUST00000119157 1064 ntBASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.66■□□□□ 0.9
Cpsf1Q9EPU4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Gm18766-201ENSMUST00000189811 808 ntBASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf1Q9EPU4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC20.64■□□□□ 0.9
Cpsf1Q9EPU4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Cpsf1Q9EPU4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf1Q9EPU4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf1Q9EPU4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf1Q9EPU4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cpsf1Q9EPU4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cpsf1Q9EPU4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Gm13823-201ENSMUST00000119930 345 ntBASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Gm27430-201ENSMUST00000184585 107 ntBASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Gm44333-201ENSMUST00000197168 107 ntBASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf1Q9EPU4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms