Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp1bQ9EPL6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Mmp1bQ9EPL6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Gm15794-201ENSMUST00000120182 631 ntBASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp1bQ9EPL6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp1bQ9EPL6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Rprl3-201ENSMUST00000157400 290 ntBASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Gm25406-201ENSMUST00000157599 105 ntBASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Gm21362-201ENSMUST00000194272 928 ntBASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp1bQ9EPL6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp1bQ9EPL6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms