Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc7Q9D541 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Gm11764-201ENSMUST00000120221 623 ntBASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc7Q9D541 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Gm12008-201ENSMUST00000117791 755 ntBASIC17.66■□□□□ 0.42
Ccdc7Q9D541 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc7Q9D541 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc7Q9D541 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc7Q9D541 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc7Q9D541 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc7Q9D541 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc7Q9D541 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc7Q9D541 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc7Q9D541 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ccdc7Q9D541 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms