Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Chd1lQ9CXF7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd1lQ9CXF7 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.08■□□□□ 0.33
Chd1lQ9CXF7 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.08■□□□□ 0.33
Chd1lQ9CXF7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd1lQ9CXF7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Chd1lQ9CXF7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm22697-201ENSMUST00000175194 63 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm8825-201ENSMUST00000182565 998 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm4518-201ENSMUST00000182638 718 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1lQ9CXF7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Gm12008-201ENSMUST00000117791 755 ntBASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1lQ9CXF7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd1lQ9CXF7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1lQ9CXF7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd1lQ9CXF7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms