Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.39□□□□□ -0.43
Rer1Q9CQU3 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Rer1Q9CQU3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rer1Q9CQU3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rer1Q9CQU3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rer1Q9CQU3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms