Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Gm14928-201ENSMUST00000120198 477 ntBASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx6-1Q99MA9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Gm27838-201ENSMUST00000184829 128 ntBASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx6-1Q99MA9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Gm18766-201ENSMUST00000189811 808 ntBASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Gm44344-201ENSMUST00000200287 129 ntBASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-1Q99MA9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms