Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sf3b3Q921M3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Gm13464-201ENSMUST00000119418 935 ntBASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Shd-206ENSMUST00000225145 998 ntBASIC18.07■□□□□ 0.48
Sf3b3Q921M3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sf3b3Q921M3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Gm27838-201ENSMUST00000184829 128 ntBASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Sf3b3Q921M3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Syt7-204ENSMUST00000223586 1344 ntBASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.05■□□□□ 0.48
Sf3b3Q921M3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Gm7488-201ENSMUST00000117148 684 ntBASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Gm45098-201ENSMUST00000207179 657 ntBASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sf3b3Q921M3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sf3b3Q921M3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms