Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb6Q91XZ4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb6Q91XZ4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb6Q91XZ4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb6Q91XZ4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhb6Q91XZ4 Efs-202ENSMUST00000227037 2540 ntBASIC15.52■□□□□ 0.07
Pcdhb6Q91XZ4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb6Q91XZ4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb6Q91XZ4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb6Q91XZ4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb6Q91XZ4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Gm27300-201ENSMUST00000184085 97 ntBASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Gm27335-201ENSMUST00000184758 97 ntBASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Gm27741-201ENSMUST00000185060 237 ntBASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Gm2651-201ENSMUST00000203560 838 ntBASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.51■□□□□ 0.07
Pcdhb6Q91XZ4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Pcdhb6Q91XZ4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb6Q91XZ4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms