Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx41Q91VN6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx41Q91VN6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 BC037039-201ENSMUST00000192003 2205 ntBASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx41Q91VN6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx41Q91VN6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx41Q91VN6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx41Q91VN6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Ddx41Q91VN6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx41Q91VN6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx41Q91VN6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ddx41Q91VN6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Ddx41Q91VN6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms