Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Odf4Q8VI88 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Odf4Q8VI88 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Odf4Q8VI88 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Odf4Q8VI88 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.56□□□□□ -0.24
Odf4Q8VI88 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Gm15173-201ENSMUST00000122049 433 ntBASIC13.56□□□□□ -0.24
Odf4Q8VI88 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.56□□□□□ -0.24
Odf4Q8VI88 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.56□□□□□ -0.24
Odf4Q8VI88 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Odf4Q8VI88 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.55□□□□□ -0.24
Odf4Q8VI88 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Odf4Q8VI88 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.54□□□□□ -0.24
Odf4Q8VI88 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.54□□□□□ -0.24
Odf4Q8VI88 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms