Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.64■□□□□ 0.09
Trim60Q8VI40 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.64■□□□□ 0.09
Trim60Q8VI40 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.64■□□□□ 0.09
Trim60Q8VI40 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim60Q8VI40 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.63■□□□□ 0.09
Trim60Q8VI40 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Grk6-207ENSMUST00000225925 2769 ntBASIC15.63■□□□□ 0.09
Trim60Q8VI40 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Gm12134-201ENSMUST00000122109 520 ntBASIC15.63■□□□□ 0.09
Trim60Q8VI40 Gm12895-201ENSMUST00000122214 226 ntBASIC15.63■□□□□ 0.09
Trim60Q8VI40 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Gm21362-201ENSMUST00000194272 928 ntBASIC15.63■□□□□ 0.09
Trim60Q8VI40 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.63■□□□□ 0.09
Trim60Q8VI40 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim60Q8VI40 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.62■□□□□ 0.09
Trim60Q8VI40 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trim60Q8VI40 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.62■□□□□ 0.09
Trim60Q8VI40 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.62■□□□□ 0.09
Trim60Q8VI40 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim60Q8VI40 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms