Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh18Q8VHR0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Gm11950-201ENSMUST00000121615 838 ntBASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Gm6345-202ENSMUST00000180900 204 ntBASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Gm45328-201ENSMUST00000210942 917 ntBASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh18Q8VHR0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh18Q8VHR0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Gm23634-201ENSMUST00000175071 91 ntBASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh18Q8VHR0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms