Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.61□□□□□ -0.23
Rab40bQ8VHP8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Gm12008-201ENSMUST00000117791 755 ntBASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Gm8344-201ENSMUST00000119813 856 ntBASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Rprl3-201ENSMUST00000157400 290 ntBASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab40bQ8VHP8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Gm6433-201ENSMUST00000118634 875 ntBASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab40bQ8VHP8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms