Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpa1Q8VEE4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Gm11355-201ENSMUST00000121120 306 ntBASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpa1Q8VEE4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Mir7071-201ENSMUST00000184847 69 ntBASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpa1Q8VEE4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.22■□□□□ 0.03
Rpa1Q8VEE4 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms