Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp7Q8R1T1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Chmp7Q8R1T1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gm13453-201ENSMUST00000118708 357 ntBASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gm27306-201ENSMUST00000183970 107 ntBASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gm29541-201ENSMUST00000191351 678 ntBASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gm43767-201ENSMUST00000198933 381 ntBASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Chmp7Q8R1T1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 App-207ENSMUST00000227737 2827 ntBASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Gm5186-201ENSMUST00000218781 920 ntBASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Gm6888-201ENSMUST00000221983 706 ntBASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp7Q8R1T1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Gm27437-201ENSMUST00000183429 107 ntBASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp7Q8R1T1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Gm25144-201ENSMUST00000179561 110 ntBASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Gm25352-201ENSMUST00000179815 110 ntBASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp7Q8R1T1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms