Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.44□□□□□ -0.1
CroccQ8CJ40 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.44□□□□□ -0.1
CroccQ8CJ40 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Gm4899-201ENSMUST00000178708 719 ntBASIC14.44□□□□□ -0.1
CroccQ8CJ40 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CroccQ8CJ40 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.43□□□□□ -0.1
CroccQ8CJ40 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Gm14140-201ENSMUST00000119999 995 ntBASIC14.43□□□□□ -0.1
CroccQ8CJ40 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.43□□□□□ -0.1
CroccQ8CJ40 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CroccQ8CJ40 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CroccQ8CJ40 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms