Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc38Q8CDN8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Sybu-209ENSMUST00000228639 4113 ntBASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Gm27459-201ENSMUST00000184860 107 ntBASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Gm6089-201ENSMUST00000197666 938 ntBASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc38Q8CDN8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Gm9103-201ENSMUST00000119371 405 ntBASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc38Q8CDN8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Gm25990-201ENSMUST00000102440 86 ntBASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Gm18489-201ENSMUST00000172565 551 ntBASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Gm10499-201ENSMUST00000174094 934 ntBASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Gm43347-201ENSMUST00000200226 580 ntBASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc38Q8CDN8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms