Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Prpf31Q8CCF0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf31Q8CCF0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Prpf31Q8CCF0 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.52■□□□□ 0.23
Prpf31Q8CCF0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Prpf31Q8CCF0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Rpph1-201ENSMUST00000175096 319 ntBASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Gm27494-201ENSMUST00000184735 189 ntBASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Gm45612-201ENSMUST00000211320 160 ntBASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Gm10154-201ENSMUST00000084445 354 ntBASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf31Q8CCF0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Gm11025-201ENSMUST00000140773 466 ntBASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Prpf31Q8CCF0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf31Q8CCF0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Mir1895-201ENSMUST00000122615 79 ntBASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf31Q8CCF0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms