Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Gm7063-201ENSMUST00000186840 981 ntBASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.57■□□□□ 0.4
Vps53Q8CCB4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps53Q8CCB4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Gm18622-201ENSMUST00000219361 595 ntBASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps53Q8CCB4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 BC037039-201ENSMUST00000192003 2205 ntBASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps53Q8CCB4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.54■□□□□ 0.4
Vps53Q8CCB4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms