Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Gm25911-201ENSMUST00000157621 56 ntBASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.2■□□□□ 0.02
Pabpc5Q8C7D3 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Gm10175-201ENSMUST00000086013 645 ntBASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.19■□□□□ 0.02
Pabpc5Q8C7D3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Mir3113-201ENSMUST00000175478 76 ntBASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pabpc5Q8C7D3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.17■□□□□ 0.02
Pabpc5Q8C7D3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms