Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm36967-201ENSMUST00000193814 266 ntBASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tsen54Q8C2A2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tsen54Q8C2A2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Gm44450-201ENSMUST00000199528 114 ntBASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tsen54Q8C2A2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Gm29707-201ENSMUST00000196325 491 ntBASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms