Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Grk6-207ENSMUST00000225925 2769 ntBASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps9d1Q8C190 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Gm24589-201ENSMUST00000116692 94 ntBASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps9d1Q8C190 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps9d1Q8C190 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Vps9d1Q8C190 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Gm44454-201ENSMUST00000198541 138 ntBASIC14.14□□□□□ -0.15
Vps9d1Q8C190 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.14□□□□□ -0.15
Vps9d1Q8C190 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps9d1Q8C190 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps9d1Q8C190 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms